Comparative genomics of canine parvovirus in South America : diversification patterns in local populations
Canine parvovirus (CPV) is a significant pathogen in domestic dogs worldwide, causing a severe and often fatal disease. CPV comprises three antigenic variants (2a, 2b, and 2c) distributed unevenly among several phylogenetic groups. The present study compared genetic variability and evolutionary patt...
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| المؤلف الرئيسي: | |
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| مؤلفون آخرون: | , , , , |
| التنسيق: | article |
| اللغة: | الإنجليزية |
| منشور في: |
2024
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| الموضوعات: | |
| الوصول للمادة أونلاين: | https://hdl.handle.net/20.500.12008/48733 |
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| _version_ | 1868890235464581120 |
|---|---|
| author | Grecco Patiño, Sofía |
| author2 | Condon Agustoni, Emma María Bucafusco, Danilo Bratanich, Ana Cristina Panzera Crespo, Yanina Pérez Crossa, Ruben Gustavo |
| author2_role | author author author author author |
| author_browse | Bratanich, Ana Cristina Bucafusco, Danilo Condon Agustoni, Emma María Grecco Patiño, Sofía Panzera Crespo, Yanina Pérez Crossa, Ruben Gustavo |
| author_facet | Grecco Patiño, Sofía Condon Agustoni, Emma María Bucafusco, Danilo Bratanich, Ana Cristina Panzera Crespo, Yanina Pérez Crossa, Ruben Gustavo |
| author_role | author |
| collection | COLIBRI |
| dc.contributor.none.fl_str_mv | Grecco Patiño Sofía, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Condon Agustoni Emma María, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Bucafusco Danilo Bratanich Ana Cristina Panzera Crespo Yanina, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Pérez Crossa Ruben Gustavo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. |
| dc.coverage.none.fl_str_mv | Uruguay Argentina |
| dc.creator.none.fl_str_mv | Grecco Patiño, Sofía Condon Agustoni, Emma María Bucafusco, Danilo Bratanich, Ana Cristina Panzera Crespo, Yanina Pérez Crossa, Ruben Gustavo |
| dc.date.none.fl_str_mv | 2024 2025-03-21T16:02:18Z 2025-03-21T16:02:18Z |
| dc.format.none.fl_str_mv | 9 h. application/pdf |
| dc.identifier.none.fl_str_mv | Grecco Patiño, S, Condon Agustoni, E, Bucafusco, D, [y otros autores]. "Comparative genomics of canine parvovirus in South America : diversification patterns in local populations". Infection. [en línea] 2024 Genetics and Evolution, 2024, 123 (2024): 105633. 9 h. DOI: 10.1016/j.meegid.2024.105633. 1567-7257 https://hdl.handle.net/20.500.12008/48733 10.1016/j.meegid.2024.105633 |
| dc.language.none.fl_str_mv | en_US eng |
| dc.publisher.none.fl_str_mv | Elsevier |
| dc.relation.none.fl_str_mv | Infection, Genetics and Evolution, 2024, 123 (2024): 105633 |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
| dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
| dc.subject.none.fl_str_mv | Canine parvovirus Evolution Local diversification |
| dc.title.none.fl_str_mv | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| dc.type.none.fl_str_mv | Artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
| description | Canine parvovirus (CPV) is a significant pathogen in domestic dogs worldwide, causing a severe and often fatal disease. CPV comprises three antigenic variants (2a, 2b, and 2c) distributed unevenly among several phylogenetic groups. The present study compared genetic variability and evolutionary patterns in South American CPV populations. We collected samples from puppies suspected of CPV infection in the neighboring Argentina and Uruguay. Antigenic variants were preliminarily characterized using PCR-RFLP and partial vp2 sequencing. Samples collected in Argentina during 2008–2018 were mainly of the 2c variant. In the Uruguayan strains (2012–2019), the 2a variant wholly replaced the 2c from 2014. Full-length coding genome and vp2 sequences were compared with global strains. The 2c and 2a strains fell by phylogenetic analysis into two phylogroups (Europe I and Asia I). The 2c strains from Argentina and Uruguay clustered in the Europe I group, with strains from America, Europe, Asia, and Oceania. Europe I is widely distributed in South America in the dog population and is also being detected in the wildlife population. The 2a strains from Uruguay formed the distinct Asia I group with strains from Asia, Africa, America, and Oceania. This Asia I group is increasing its distribution in South America and worldwide. Our research reveals high genetic variability in adjacent synchronic samples and different evolutionary patterns in South American CPV. We also highlight the importance of ancestral migrations and local diversification in the evolution of global CPV strains. |
| eu_rights_str_mv | openAccess |
| format | article |
| id | anni_f5ab3827bb2e779af686d95339fa9cc2 |
| identifier_str_mv | Grecco Patiño, S, Condon Agustoni, E, Bucafusco, D, [y otros autores]. "Comparative genomics of canine parvovirus in South America : diversification patterns in local populations". Infection. [en línea] 2024 Genetics and Evolution, 2024, 123 (2024): 105633. 9 h. DOI: 10.1016/j.meegid.2024.105633. 1567-7257 10.1016/j.meegid.2024.105633 |
| instacron_str | Universidad de la República |
| institution | Universidad de la República |
| instname_str | Universidad de la República |
| language | eng |
| language_invalid_str_mv | en_US |
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| oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/48733 |
| publishDate | 2024 |
| publishDateSort | 2024 |
| publisher.none.fl_str_mv | Elsevier |
| reponame_str | COLIBRI |
| repository.mail.fl_str_mv | |
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| rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
| spelling | Comparative genomics of canine parvovirus in South America : diversification patterns in local populationsGrecco Patiño, SofíaCondon Agustoni, Emma MaríaBucafusco, DaniloBratanich, Ana CristinaPanzera Crespo, YaninaPérez Crossa, Ruben GustavoCanine parvovirusEvolutionLocal diversificationCanine parvovirus (CPV) is a significant pathogen in domestic dogs worldwide, causing a severe and often fatal disease. CPV comprises three antigenic variants (2a, 2b, and 2c) distributed unevenly among several phylogenetic groups. The present study compared genetic variability and evolutionary patterns in South American CPV populations. We collected samples from puppies suspected of CPV infection in the neighboring Argentina and Uruguay. Antigenic variants were preliminarily characterized using PCR-RFLP and partial vp2 sequencing. Samples collected in Argentina during 2008–2018 were mainly of the 2c variant. In the Uruguayan strains (2012–2019), the 2a variant wholly replaced the 2c from 2014. Full-length coding genome and vp2 sequences were compared with global strains. The 2c and 2a strains fell by phylogenetic analysis into two phylogroups (Europe I and Asia I). The 2c strains from Argentina and Uruguay clustered in the Europe I group, with strains from America, Europe, Asia, and Oceania. Europe I is widely distributed in South America in the dog population and is also being detected in the wildlife population. The 2a strains from Uruguay formed the distinct Asia I group with strains from Asia, Africa, America, and Oceania. This Asia I group is increasing its distribution in South America and worldwide. Our research reveals high genetic variability in adjacent synchronic samples and different evolutionary patterns in South American CPV. We also highlight the importance of ancestral migrations and local diversification in the evolution of global CPV strains.ANII: FCE_1_2023_1_176074ElsevierGrecco Patiño Sofía, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Condon Agustoni Emma María, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Bucafusco DaniloBratanich Ana CristinaPanzera Crespo Yanina, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Pérez Crossa Ruben Gustavo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2025-03-21T16:02:18Z2025-03-21T16:02:18Z2024Artículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion9 h.application/pdfGrecco Patiño, S, Condon Agustoni, E, Bucafusco, D, [y otros autores]. "Comparative genomics of canine parvovirus in South America : diversification patterns in local populations". Infection. [en línea] 2024 Genetics and Evolution, 2024, 123 (2024): 105633. 9 h. DOI: 10.1016/j.meegid.2024.105633.1567-7257https://hdl.handle.net/20.500.12008/4873310.1016/j.meegid.2024.105633reponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la Repúblicaen_USengInfection, Genetics and Evolution, 2024, 123 (2024): 105633UruguayArgentinaLas obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)oai:colibri.udelar.edu.uy:20.500.12008/487332026-04-14T10:10:44Z |
| spellingShingle | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations Grecco Patiño, Sofía Canine parvovirus Evolution Local diversification |
| status_str | publishedVersion |
| title | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| title_full | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| title_fullStr | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| title_full_unstemmed | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| title_short | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| title_sort | Comparative genomics of canine parvovirus in South America : diversification patterns in local populations |
| topic | Canine parvovirus Evolution Local diversification |
| url | https://hdl.handle.net/20.500.12008/48733 |