Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA
The extinct Gomphotheriidae is the only proboscidean family that colonized South America. The phylogenetic position of the endemic taxa has been through several revisions using morphological comparisons. Morphological studies are enhanced by paleogenetic analyses, a powerful tool to resolve phylogen...
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| Sprache: | Englisch |
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2021
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| Online-Zugang: | https://hdl.handle.net/20.500.12008/46496 |
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| _version_ | 1868890080524894208 |
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| author | Baleka, Sina |
| author2 | Varela, Luciano Tambusso, P. Sebastián Paijmans, Johanna L.A. Mothé, Dimila Stafford, Thomas W. Fariña, Richard Hofreiter, Michael |
| author2_role | author author author author author author author |
| author_browse | Baleka, Sina Fariña, Richard Hofreiter, Michael Mothé, Dimila Paijmans, Johanna L.A. Stafford, Thomas W. Tambusso, P. Sebastián Varela, Luciano |
| author_facet | Baleka, Sina Varela, Luciano Tambusso, P. Sebastián Paijmans, Johanna L.A. Mothé, Dimila Stafford, Thomas W. Fariña, Richard Hofreiter, Michael |
| author_role | author |
| collection | COLIBRI |
| dc.contributor.none.fl_str_mv | Baleka Sina Varela Luciano, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Ciencias Geológicas. Tambusso P. Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Ciencias Geológicas. Paijmans Johanna L.A. Mothé Dimila Stafford Thomas W. Fariña Richard, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Geología. Hofreiter Michael |
| dc.coverage.none.fl_str_mv | Sauce -Uruguay |
| dc.creator.none.fl_str_mv | Baleka, Sina Varela, Luciano Tambusso, P. Sebastián Paijmans, Johanna L.A. Mothé, Dimila Stafford, Thomas W. Fariña, Richard Hofreiter, Michael |
| dc.date.none.fl_str_mv | 2021 2024-10-24T12:41:05Z 2024-10-24T12:41:05Z |
| dc.format.none.fl_str_mv | 20 h application/pdf |
| dc.identifier.none.fl_str_mv | Baleka, S, Varela, L, Tambusso, P, [y otros]. "Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA". iScience. [en línea] 2021, 25:103559. 19 h. DOI: 10.1016/ j.isci.2021.103559 2589-0042 https://hdl.handle.net/20.500.12008/46496 10.1016/ j.isci.2021.103559 |
| dc.language.none.fl_str_mv | en_US eng |
| dc.publisher.none.fl_str_mv | Cell Press |
| dc.relation.none.fl_str_mv | iScience, 2021, 25:103559 |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess Licencia Creative Commons Atribución (CC - By 4.0) |
| dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
| dc.subject.none.fl_str_mv | FILOGENETICA NOTIOMASTODON ADN FOSILES PLEISTOCENO |
| dc.title.none.fl_str_mv | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| dc.type.none.fl_str_mv | Artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
| description | The extinct Gomphotheriidae is the only proboscidean family that colonized South America. The phylogenetic position of the endemic taxa has been through several revisions using morphological comparisons. Morphological studies are enhanced by paleogenetic analyses, a powerful tool to resolve phylogenetic relationships; however, ancient DNA (aDNA) preservation decreases in warmer regions. Despite the poor preservation conditions for aDNA in humid, sub-tropical climates, we recovered ~3,000 bp of mtDNA of Notiomastodon platensis from the Arroyo del Vizcaı´no site, Uruguay. Our calibrated phylogeny places Notiomastodon as a sister taxon to Elephantidae, with a divergence time of ~13.5 Ma. Additionally, a total evidence analysis combining morphological and paleogenetic data shows that the three most diverse clades within Proboscidea diverged during the early Miocene, coinciding with the formation of a land passage between Africa and Eurasia. Our results are a further step toward aDNA analyses on Pleistocene samples from subtropical regions and provide a framework for proboscidean evolution. |
| eu_rights_str_mv | openAccess |
| format | article |
| id | anni_65112d3e0868c1d563b522f8f59bdb13 |
| identifier_str_mv | Baleka, S, Varela, L, Tambusso, P, [y otros]. "Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA". iScience. [en línea] 2021, 25:103559. 19 h. DOI: 10.1016/ j.isci.2021.103559 2589-0042 10.1016/ j.isci.2021.103559 |
| instacron_str | Universidad de la República |
| institution | Universidad de la República |
| instname_str | Universidad de la República |
| language | eng |
| language_invalid_str_mv | en_US |
| network_acronym_str | anni |
| network_name_str | oai-lr-anni |
| oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/46496 |
| publishDate | 2021 |
| publishDateSort | 2021 |
| publisher.none.fl_str_mv | Cell Press |
| reponame_str | COLIBRI |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
| spelling | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNABaleka, SinaVarela, LucianoTambusso, P. SebastiánPaijmans, Johanna L.A.Mothé, DimilaStafford, Thomas W.Fariña, RichardHofreiter, MichaelFILOGENETICANOTIOMASTODONADNFOSILESPLEISTOCENOThe extinct Gomphotheriidae is the only proboscidean family that colonized South America. The phylogenetic position of the endemic taxa has been through several revisions using morphological comparisons. Morphological studies are enhanced by paleogenetic analyses, a powerful tool to resolve phylogenetic relationships; however, ancient DNA (aDNA) preservation decreases in warmer regions. Despite the poor preservation conditions for aDNA in humid, sub-tropical climates, we recovered ~3,000 bp of mtDNA of Notiomastodon platensis from the Arroyo del Vizcaı´no site, Uruguay. Our calibrated phylogeny places Notiomastodon as a sister taxon to Elephantidae, with a divergence time of ~13.5 Ma. Additionally, a total evidence analysis combining morphological and paleogenetic data shows that the three most diverse clades within Proboscidea diverged during the early Miocene, coinciding with the formation of a land passage between Africa and Eurasia. Our results are a further step toward aDNA analyses on Pleistocene samples from subtropical regions and provide a framework for proboscidean evolution.Cell PressBaleka SinaVarela Luciano, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Ciencias Geológicas.Tambusso P. Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Ciencias Geológicas.Paijmans Johanna L.A.Mothé DimilaStafford Thomas W.Fariña Richard, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Geología.Hofreiter Michael2024-10-24T12:41:05Z2024-10-24T12:41:05Z2021Artículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion20 happlication/pdfBaleka, S, Varela, L, Tambusso, P, [y otros]. "Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA". iScience. [en línea] 2021, 25:103559. 19 h. DOI: 10.1016/ j.isci.2021.1035592589-0042https://hdl.handle.net/20.500.12008/4649610.1016/ j.isci.2021.103559reponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la Repúblicaen_USengiScience, 2021, 25:103559Sauce -UruguayLas obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)oai:colibri.udelar.edu.uy:20.500.12008/464962026-04-14T10:10:42Z |
| spellingShingle | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA Baleka, Sina FILOGENETICA NOTIOMASTODON ADN FOSILES PLEISTOCENO |
| status_str | publishedVersion |
| title | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| title_full | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| title_fullStr | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| title_full_unstemmed | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| title_short | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| title_sort | Revisiting proboscidean phylogeny and evolution through total evidence and palaeogenetic analyses including Notiomastodon ancient DNA |
| topic | FILOGENETICA NOTIOMASTODON ADN FOSILES PLEISTOCENO |
| url | https://hdl.handle.net/20.500.12008/46496 |